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Asymmetric and Selective Biocatalysis

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ISBN: 9783038978466 9783038978473 Year: Pages: 154 DOI: 10.3390/books978-3-03897-847-3 Language: English
Publisher: MDPI - Multidisciplinary Digital Publishing Institute
Subject: Science (General) --- Chemistry (General)
Added to DOAB on : 2019-06-26 09:16:44
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This Issue contains one communication, six articles, and two reviews. The communication from Paola Vitale et al. represents a work where whole cells were used as biocatalysts for the reduction of optically active chloroalkyl arylketones followed by a chemical cyclization to give the desired heterocycles. Among the various whole cells screened (baker’s yeast, Kluyveromyces marxianus CBS 6556, Saccharomyces cerevisiae CBS 7336, Lactobacillus reuteri DSM 20016), baker’s yeast provided the best yields and the highest enantiomeric ratios (95:5) in the bioreduction of the above ketones. In this respect, valuable chiral non-racemic functionalized oxygen-containing heterocycles (e.g., (S)-styrene oxide, (S)-2-phenyloxetane, (S)-2-phenyltetrahydrofuran), amenable to be further elaborated on, can be smoothly and successfully generated from their prochiral precursors. Studies about pure biocatalysts with mechanistical studies, application in different reactions, and new immobilization methods for improving their stability were reported in five different articles. The article by Su-Yan Wang et al. describes the cloning, expression, purification, and characterization of an N-acetylglucosamine 2-epimerase from Pedobacter heparinus (PhGn2E). For this, several N-acylated glucosamine derivatives were chemically synthesized and used to test the substrate specificity of the enzyme. The mechanism of the enzyme was studied by hydrogen/deuterium NMR. The study at the anomeric hydroxyl group and C-2 position of the substrate in the reaction mixture confirmed the epimerization reaction via ring-opening/enolate formation. Site-directed mutagenesis was also used to confirm the proposed mechanism of this interesting enzyme. The article by Forest H. Andrews et al. studies two enzymes, benzoylformate decarboxylase (BFDC) and pyruvate decarboxylase (PDC), which catalyze the non-oxidative decarboxylation of 2-keto acids with different specificity. BFDC from Pseudomonas putida exhibited very limited activity with pyruvate, whereas the PDCs from S. cerevisiae or from Zymomonas mobilis showed virtually no activity with benzoylformate (phenylglyoxylate). After studies using saturation mutagenesis, the BFDC T377L/A460Y variant was obtained, with 10,000-fold increase in pyruvate/benzoylformate. The change was attributed to an improvement in the Km value for pyruvate and a decrease in the kcat value for benzoylformate. The characterization of the new catalyst was performed, providing context for the observed changes in the specificity. The article by Xin Wang et al. compares two types of biocatalysts to produce D-lysine L-lysine in a cascade process catalyzed by two enzymes: racemase from microorganisms that racemize L-lysine to give D,L-lysine and decarboxylase that can be in cells, permeabilized cells, and the isolated enzyme. The comparison between the different forms demonstrated that the isolated enzyme showed the higher decarboxylase activity. Under optimal conditions, 750.7 mmol/L D-lysine was finally obtained from 1710 mmol/L L-lysine after 1 h of racemization reaction and 0.5 h of decarboxylation reaction. D-lysine yield could reach 48.8% with enantiomeric excess (ee) of 99%. In the article by Rivero and Palomo, lipase from Candida rugosa (CRL) was highly stabilized at alkaline pH in the presence of PEG, which permitted its immobilization for the first time by multipoint covalent attachment on different aldehyde-activated matrices. Different covalent immobilized preparation of the enzyme was successfully obtained. The thermal and solvent stability was highly increased by this treatment, and the novel catalysts showed high regioselectivity in the deprotection of per-O-acetylated nucleosides. The article by Robson Carlos Alnoch et al. describes the protocol and use of a new generation of tailor-made bifunctional supports activated with alkyl groups that allow the immobilization of proteins through the most hydrophobic region of the protein surface and aldehyde groups that allows the covalent immobilization of the previously adsorbed proteins. These supports were especially used in the case of lipase immobilization. The immobilization of a new metagenomic lipase (LipC12) yielded a biocatalyst 3.5-fold more active and 5000-fold more stable than the soluble enzyme. The PEGylated immobilized lipase showed high regioselectivity, producing high yields of the C-3 monodeacetylated product at pH 5.0 and 4 °C. Hybrid catalysts composed of an enzyme and metallic complex are also treated in this Special Issue. The article by Christian Herrero et al. describes the development of the Mn(TpCPP)-Xln10A artificial metalloenzyme, obtained by non-covalent insertion of Mn(III)-meso-tetrakis(p-carboxyphenyl)porphyrin [Mn(TpCPP), 1-Mn] into xylanase 10A from Streptomyces lividans (Xln10A). The complex was found able to catalyze the selective photo-induced oxidation of organic substrates in the presence of [RuII(bpy)3]2+ as a photosensitizer and [CoIII(NH3)5Cl]2+ as a sacrificial electron acceptor, using water as oxygen atom source. The two published reviews describe different subjects with interest in the fields of biocatalysis and mix metallic-biocatalysis, respectively. The review by Anika Scholtissek et al. describes the state-of-the-art regarding ene-reductases from the old yellow enzyme family (OYEs) to catalyze the asymmetric hydrogenation of activated alkenes to produce chiral products with industrial interest. The dependence of OYEs on pyridine nucleotide coenzyme can be avoided by using nicotinamide coenzyme mimetics. In the review, three main classes of OYEs are described and characterized. The review by Yajie Wang and Huimin Zhao highlights some of the recent examples in the past three years that combine transition metal catalysis with enzymatic catalysis. With recent advances in protein engineering, catalyst synthesis, artificial metalloenzymes, and supramolecular assembly, there is great potential to develop more sophisticated tandem chemoenzymatic processes for the synthesis of structurally complex chemicals. In conclusion, these nine publications give an overview of the possibilities of different catalysts, both traditional biocatalysts and hybrids with metals or organometallic complexes to be used in different processes—particularly in synthetic reactions—under very mild reaction conditions.

Thermophiles and Thermozymes

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ISBN: 9783038978169 9783038978176 Year: Pages: 198 DOI: 10.3390/books978-3-03897-817-6 Language: English
Publisher: MDPI - Multidisciplinary Digital Publishing Institute
Subject: Science (General)
Added to DOAB on : 2019-04-25 16:37:17
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Interest in the study of life in hot environments, both with respect to the inhabiting microorganisms and the enzymes they produce, is currently very high. The biological mechanisms responsible for the resistance to high temperatures are not yet fully understood, whereas thermostability is a highly required feature for industrial applications. In this e-book, the invited authors provide diverse evidence contributing to the understanding of such mechanisms and the unlocking of the biotechnological potential of thermophiles and thermozymes.

Enzyme-Mediated Stereoselective Synthesis

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ISBN: 9783039219360 9783039219377 Year: Pages: 116 DOI: 10.3390/books978-3-03921-937-7 Language: English
Publisher: MDPI - Multidisciplinary Digital Publishing Institute
Subject: Science (General) --- Chemistry (General) --- Inorganic Chemistry
Added to DOAB on : 2020-01-07 09:08:26
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This book is a collection of studies focused on the exploitation of enzyme stereoselectivity for the synthesis of relevant chemicals, such as innovative materials, chiral building blocks, natural products, and flavor and fragrance compounds. Different catalytic approaches are reported. The first study describes a resolution-based process for the stereoselective synthesis of the enantiomeric forms of the flavor compound linaloyl oxide, whereas other enantiomeric enriched aroma compounds were obtained through a novel microbial approach based on solid-state fermentation. Two relevant works exploit the potential of the biocatalyzed reduction reactions. The first of these contributions describes the enantioselective synthesis of ?-nitroalcohols by enzyme-mediated reduction of ?-nitroketones, whereas a second contribution reports the preparation of chiral 1,4-diaryl-1,4-diols through ADH-catalyzed bioreduction of the corresponding diketones. Concerning enantioenriched alcohol derivatives, natural hydroxy fatty acids are prepared by means of the biocatalytic hydration reaction of natural fatty acids using the probiotic bacterium Lactobacillus rhamnosus as a whole-cell biocatalyst. Further studies describe the use of modified pullulan polysaccharide for lipase immobilization and the recent advances in synthetic applications of ?-transaminases for the production of chiral amines.

Synthetic and Biosynthetic Approaches to Marine Natural Products

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ISBN: 9783039284665 9783039284672 Year: Pages: 182 DOI: 10.3390/books978-3-03928-467-2 Language: English
Publisher: MDPI - Multidisciplinary Digital Publishing Institute
Subject: Medicine (General) --- Therapeutics
Added to DOAB on : 2020-04-07 23:07:09
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Marine natural products containing a heterocyclic moiety in their structure are present in a wide variety of sponges, corals, algae, and fungi. Many of them show important biological activities such as cytotoxic properties against several cancer cell lines. Their challenging chemical structures have attracted the attention of many researchers who have developed various synthetic approaches. This Special Issue presents some examples of new synthetic or biosynthetic methodologies to access this type of marine natural drug.

Catalytic Methods in Flow Chemistry

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ISBN: 9783039287321 / 9783039287338 Year: Pages: 158 DOI: 10.3390/books978-3-03928-733-8 Language: eng
Publisher: MDPI - Multidisciplinary Digital Publishing Institute
Subject: Science (General) --- Biology
Added to DOAB on : 2020-06-09 16:38:57
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The chemical industry is essential in the daily humn life of modern society; despite the misconception about the real need for chemical production, everyone enjoys the benefit of the chemical progress. However, the chemical industry generates a large variety of products, including (i) basic chemicals, e.g., polymers, petrochemicals, and basic inorganics; (ii) specialty chemicals for crop protection, paints, inks, colorants, textiles, paper, and engineering; and (iii) consumer chemicals, including detergents, soaps, etc. For these reasons, chemists in both acdemia and industry are challenged with developing green and sustainable chemical production towrad the full-recycling of feedstocks and waste. Aiming to improve the intensification of the process, chemists have established chemical reactions based on catalysis, as well as alternative technologies, such as continuous flow. The aim of this book is to cover promising recent research and novel trends in the field of novel catalytic reactions (homogeneous, heterogeneous, and enzymatic, as well as their combinations) in continuous flow conditions. A collection of recent contribution for conversion of starting material originated from petroleum resources or biomass into highly-added value chemicals are reported.

Genetic and Epigenetic Modulation of Cell Functions by Physical Exercise

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ISBN: 9783039284801 / 9783039284818 Year: Pages: 170 DOI: 10.3390/books978-3-03928-481-8 Language: eng
Publisher: MDPI - Multidisciplinary Digital Publishing Institute
Subject: Science (General) --- Biology --- Genetics
Added to DOAB on : 2020-06-09 16:38:57
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From an evolutionary perspective, our species has relied upon physical activity for most of its history to survive and has had to escape from predators, to scavenge for food, and to use physique to work or build necessary means for everyday life. Physical activity has been part of our evolution and progress since the very beginning and, consequently, our entire body has been programmed to be active physically. In the last 20 years, scientific research has increasingly shown that our ancient survival principle has beneficial effects not only on the cells and organs involved in physical activities but on the metabolism of the entire organism, influencing the homeostasis and integration of all bodily functions, likely stimulating the production of hormones and other regulatory molecules, with each affecting vital signalling pathways. Most of the web of factors involved in molecular signalling upon exercise are suspected to be centrally controlled by the brain, which has been reported to be deeply modified by physical activity. Such complexity requires a multifaceted approach to shed light on the molecular interactions that occur between physical activity and its outcome at a cellular level.

Recent Advances in Biocatalysis and Metabolic Engineering for Biomanufacturing

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ISBN: 9783039215744 9783039215751 Year: Pages: 278 DOI: 10.3390/books978-3-03921-575-1 Language: English
Publisher: MDPI - Multidisciplinary Digital Publishing Institute
Subject: Technology (General) --- Biotechnology
Added to DOAB on : 2019-12-09 11:49:15
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The use of biocatalysts, including enzymes and metabolically engineered cells, has attracted a great deal of attention in the chemical and bio-industry, because biocatalytic reactions can be conducted under environmentally-benign conditions and in more sustainable ways. The catalytic efficiency and chemo-, regio-, and stereo-selectivity of enzymes can be enhanced and modulated using protein engineering. Metabolic engineering seeks to enhance cellular biosynthetic productivity of target metabolites via controlling and redesigning metabolic pathways using multi-omics analysis, genome-scale modeling, metabolic flux control, and reconstruction of novel pathways. The aim of this book is to cover the recent advances in biocatalysis and metabolic engineering for biomanufacturing of biofuels, chemicals, biomaterials, and pharmaceuticals. Reviews and original research articles on the development of new strategies to improve the catalytic efficiency of enzymes, biosynthetic capability of cell factories, and their applications in production of various bioproducts and chemicals are included.

Keywords

artificial self-sufficient P450 --- bioplastics --- dodecanoic acid --- Nylon 12 --- ?-aminododecanoic acid --- immobilization --- fluorescein diacetate --- polyurethane foam --- biofilm --- total enzymatic activity --- biocatalysis --- Combi-CLEAs --- cascade reactions --- immobilization --- Myceliophthora --- glyoxal oxidase --- 5-hydroxymethylfurfural --- aerobic methane bioconversion --- bioreactor --- string film reactor --- mass transfer performance --- cross-linked enzyme aggregate --- amyloglucosidase --- magnetic nanoparticles --- bovine serum albumin --- polyethyleneimine --- starch hydrolysis --- Eversa --- interfacial activation --- lipase immobilization --- enzyme stabilization --- enzyme modulation --- metabolic engineering --- synthetic biology --- 3-hydroxypropionic acid --- microbial production --- fatty acid synthesis --- acetate --- redox enzymes --- FTIR spectroscopy --- small molecules --- Corynebacterium glutamicum --- Pvgb --- tunable expression system --- expression vectors --- synthetic biology --- Vitreoscilla --- vgb --- biocatalysts --- biocatalytic reaction --- Methylosinus sporium strain 5 --- soluble methane monooxygenase --- C–H activation --- O2 activation --- synthetic biology --- metabolic engineering --- microbial cell factory --- synthetic metabolic pathways --- mannose --- magnetic nanoparticles --- immobilization --- whole cell --- specific recognition --- 12-hydroxydodecanoic acid --- dodecanoic acid --- CYP153A --- whole-cell biotransformation --- Candida antarctica Lipase B --- transesterification --- polymer functionalization --- tetraethylene glycol --- poly(ethylene glycol) --- hydrogenase --- bio-hydrogen --- chemicals addition --- review --- (?)-?-bisabolol --- mevalonate (MVA) --- mevalonate kinase 1 --- Methanosarcina mazei --- fed-batch fermentation --- monoterpene --- prokaryotic microbial factory --- metabolic engineering --- MEP pathway --- MEV pathway --- n/a

Green Synthesis of Nanomaterials

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ISBN: 9783039217861 9783039217878 Year: Pages: 224 DOI: 10.3390/books978-3-03921-787-8 Language: English
Publisher: MDPI - Multidisciplinary Digital Publishing Institute
Subject: Science (General) --- Biology --- Microbiology
Added to DOAB on : 2019-12-09 16:10:12
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Nanomaterials possess astonishing physical and chemical properties. They play a key role in the development of novel and effective drugs, catalysts, sensors, and pesticides, to cite just a few examples. Notably, the synthesis of nanomaterials is usually achieved with chemical and physical methods needing the use of extremely toxic chemicals or high-energy inputs. To move towards more eco-friendly processes, researchers have recently focused on so-called “green synthesis”, where microbial, animal-, and plant-borne compounds can be used as cheap reducing and stabilizing agents to fabricate nanomaterials. Green synthesis routes are cheap, environmentally sustainable, and can lead to the fabrication of nano-objects with controlled sizes and shapes—two key features determining their bioactivity.

Biofuel and Bioenergy Technology

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ISBN: 9783038975960 Year: Pages: 425 DOI: 10.3390/books978-3-03897-597-7 Language: English
Publisher: MDPI - Multidisciplinary Digital Publishing Institute
Subject: Technology (General) --- General and Civil Engineering
Added to DOAB on : 2019-03-21 14:08:22
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The subject of this book is ""Biofuel and Bioenergy Technology"". It aims to publish high-quality review and research papers, addressing recent advances in biofuel and bioenergy. State-of-the-art studies of advanced techniques of biorefinery for biofuel production are also included. Research involving experimental studies, recent developments, and novel and emerging technologies in this field are covered. This book contains twenty-seven technical papers which cover diversified biofuel and bioenergy technology-related research that have shown critical results and contributed significant findings to the fields of biomass processing, pyrolysis, bio-oil and its emulsification; transesterification and biodiesel, gasification and syngas, fermentation and biogas/methane, bioethanol and alcohol-based fuels, solid fuel and biochar, and microbial fuel cell and power generation development. The published contents relate to the most important techniques and analyses applied in the biofuel and bioenergy technology.

Keywords

air-steam gasification --- equilibrium model --- tar --- energy exchange --- exergy efficiency --- bio-electro-Fenton microbial fuel cells (Bio-E-Fenton MFCs) --- wastewater --- photo catalyst --- degradation --- calcination --- chemical oxygen demand (COD) --- MFC --- hydrodynamic boundary layer --- recirculation mode --- shear rate --- voltage --- charge transfer resistance --- biodiesel --- direct transesterification --- Rhodotorula glutinis --- single cell oil --- biogas --- tri-reforming process --- syngas --- methane and carbon dioxide conversion --- hydrogen/carbon monoxide ratio --- first-law/second-law efficiency --- biodiesel --- esterification --- liquid lipase --- superabsorbent polymer --- response surface methodology --- waste wood --- torrefaction --- energy yield --- mass yield --- CHO index --- gross calorific value --- Van Krevelen diagram --- anaerobic digestion --- biogas production --- wastewater treatment --- membrane bioreactors --- anaerobic digestion --- methane --- carbon dioxide --- small-scale biogas plants --- developing countries --- SOFC --- validation --- simulation --- exergy --- syngas --- Chlorella --- coal-fired flue-gas --- screening --- biodiesel property --- mixotrophic cultivation --- thermophilic anaerobic digestion --- corn stover --- prairie cord grass --- unbleached paper --- digester performance --- process stability --- synergistic effects --- microbial community --- Methanothermobacter --- biochemical methane potential --- redox potential reduction --- direct interspecies electron transfer --- electroactive biofilm --- Nejayote --- granular activated carbon --- Jerusalem artichoke --- lignocellulose --- acid pretreatment --- nitric acid --- alkali pretreatment --- enzymatic hydrolysis --- ethanol fermentation --- waste biomass --- Vietnam --- solid biofuel --- calorific value --- mechanical durability --- fatty acid methyl ester --- catalyst --- viscosity --- iodine value --- acidity index --- sewage sludge --- pyrolytic oil --- Taguchi method --- thermogravimetric analysis --- synergistic effect --- combined pretreatment --- ball mill --- ethanol organosolv --- herbaceous biomass --- lignin recovery --- Annona muricata --- biodiesel production --- seed oil --- soursop --- two-step process --- response surface methodology --- RSM --- second-generation biodiesel --- stone fruit --- optimisation --- biodiesel testing --- transesterification --- lignocellulosic biomass --- Miscanthus --- mechanical pretreatment --- organosolv pretreatment --- microbial biofuel --- metabolic engineering --- alkanes --- alcohols --- acetone --- electrochemical hydrogenation --- isopropanol --- membrane contamination --- polymer electrolyte membrane --- relative humidity --- diesel --- Carica papaya --- engine performance --- biodiesel --- characterisation --- porosity --- thermophoretic force --- biomass fuel --- non-premixed combustion --- counter-flow structure --- mathematical modeling --- emulsification --- liquefaction --- bio-oils --- co-surfactant --- surfactant --- diesel --- biogas --- Clostridiales --- hydrogen-producing bacteria --- bioreactors --- anaerobic fermentation --- anaerobic digestion --- microbial community composition

Human Milk and Lactation

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ISBN: 9783039289233 / 9783039289240 Year: Pages: 368 DOI: 10.3390/books978-3-03928-924-0 Language: eng
Publisher: MDPI - Multidisciplinary Digital Publishing Institute
Subject: Science (General) --- Biology --- Nutrition and Food Sciences
Added to DOAB on : 2020-06-09 16:38:57
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Human milk is uniquely tailored to meet infants’ specific nutritional requirements. However, it is more than just “milk”. This dynamic and bioactive fluid allows mother–infant signalling over lactation, guiding the infant in the developmental and physiological processes. It exerts protection and life-long biological effects, playing a crucial role in promoting healthy growth and optimal cognitive development. The latest scientific advances have provided insight into different components of human milk and their dynamic changes over time. However, the complexity of human milk composition and the synergistic mechanisms responsible for its beneficial health effects have not yet been unravelled. Filling this knowledge gap will shed light on the biology of the developing infant and will contribute to the optimization of infant feeding, particularly that of the most vulnerable infants. Greater understanding of human milk will also help in elucidating the best strategies for its storage and handling. The increasing knowledge on human milk’s bioactive compounds together with the rapidly-advancing technological achievements will greatly enhance their use as prophylactic or therapeutic agents. The current Special Issue aims to welcome original works and literature reviews further exploring the complexity of human milk composition, the mechanisms underlying the beneficial effects associated with breastfeeding, and the factors and determinants involved in lactation, including its promotion and support.

Keywords

human milk --- preterm --- term --- infants --- lipids --- fatty acids --- human milk fortification --- docosahexaenoic acid (DHA) --- mothers’ own milk --- donor human milk --- arachidonic acid (ARA) --- eicosapentaenoic acid (EPA) --- bioactive factors --- carotenoids --- dietary intake --- high-performance liquid chromatography (HPLC) --- human milk --- lactation --- maternal diet --- prospective study --- Human Milk --- Preterm infant --- Phospholipids --- Lipidomics --- Milk Fat Globule Membrane --- breastfeeding --- late preterm --- protective factors --- promotion of breastfeeding --- breastfeeding support --- mammary gland --- immune-active proteins --- proteases --- protease inhibitors --- digestive tract --- antenatal --- expressing --- pregnancy --- video instruction --- colostrum --- breastfeeding --- online --- clinical trial --- lactation --- infants --- breastfeeding --- lactating women --- human milk benefits --- colostrum --- milk therapy --- bioactive factors --- 2?-fucosyllactose (2?FL) --- 3?-sialyllactose (3?SL) --- disialyllacto-N-tetraose (DSLNT) --- human milk oligosaccharides (HMO) --- milk group --- secretor --- Lewis --- lactation --- preterm --- adipokines --- antioxidants --- breastfeeding --- cytokines --- growth factors --- human milk --- preterm --- term --- neonate --- infant --- macronutrients --- protein --- fat --- lactose --- nutrition --- passive immunization --- maternal immunoglobulins --- lactation --- prematurity --- flu vaccine --- human milk --- human milk --- omega-3 fatty acids --- docosahexaenoic acid --- eicosapentaenoic acid --- ?-linolenic acid --- dietary intake --- food frequency questionnaire --- vitamin D deficiency --- supplementation --- breastfeeding --- mothers --- infants --- human milk --- targeted metabolomics --- amino acids --- lipid metabolites --- LC-MS --- flow injection analysis --- human milk --- protein --- glycoprotein --- endogenous peptide --- breastfeeding --- hormones --- adipokines --- breast milk --- growth --- body composition --- term infant --- human milk --- term --- preterm --- calcium --- phosphorus --- magnesium --- zinc --- iron --- copper --- iodine --- selenium --- potassium --- sodium --- n-9 fatty acid --- nervonic acid --- human milk fat --- infant formula --- lactational stage --- donor human milk --- high pressure processing --- carotenoids --- antioxidant capacity --- lipids --- bile salt stimulated lipase --- preterm --- retinol --- ?-tocopherol --- inadequate intake --- nutritional status --- breast milk --- undernourishment --- dietary assessment --- multiple source method --- human milk --- celiac disease --- hormones --- fatty acids --- duration of lactation --- country --- carbohydrate --- fat --- breastfeeding difficulties --- early breastfeeding cessation --- term infants --- breastfeeding support --- human milk --- donor milk --- choline --- phosphocholine --- storage --- pasteurization --- milk banking --- pumping --- breastfeeding --- lactation --- n/a

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