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Modeling the Plankton - Enhancing the Integration of Biological Knowledge and Mechanistic Understanding

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Book Series: Frontiers Research Topics ISSN: 16648714 ISBN: 9782889453658 Year: Pages: 228 DOI: 10.3389/978-2-88945-365-8 Language: English
Publisher: Frontiers Media SA
Subject: Science (General) --- Oceanography
Added to DOAB on : 2018-02-27 16:16:45
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In light of climate change and allied changes to marine ecosystems, mathematical models have become an important tool to examine processes and predict phenomena from local through to global scales. In recent years model studies, laboratory experiments and a better ecological understanding of the pelagic ecosystem have enabled advancements on fundamental challenges in oceanography, including marine production, biodiversity and anticipation of future conditions in the ocean. This research topic presents a number of studies that investigate functionally diverse organism in a dynamic ocean through diverse and novel modeling approaches.

Microbiology of the Rapidly Changing Polar Environments

Authors: --- --- ---
Book Series: Frontiers Research Topics ISSN: 16648714 ISBN: 9782889455133 Year: Pages: 315 DOI: 10.3389/978-2-88945-513-3 Language: English
Publisher: Frontiers Media SA
Subject: Science (General) --- Oceanography --- Microbiology
Added to DOAB on : 2019-01-23 14:53:42
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Marine and freshwater polar environments are characterized by intense physical forces and strong seasonal variations. The persistent cold and sometimes inhospitable conditions create unique ecosystems and habitats for microbial life. Polar microbial communities are diverse productive assemblages, which drive biogeochemical cycles and support higher food-webs across the Arctic and over much of the Antarctic. Recent studies on the biogeography of microbial species have revealed phylogenetically diverse polar ecotypes, suggesting adaptation to seasonal darkness, sea-ice coverage and high summer irradiance. Because of the diversity of habitats related to atmospheric and oceanic circulation, and the formation and melting of ice, high latitude oceans and lakes are ideal environments to investigate composition and functionality of microbial communities. In addition, polar regions are responding more dramatically to climate change compared to temperate environments and there is an urgent need to identify sensitive indicators of ecosystem history, that may be sentinels for change or adaptation. For instance, Antarctic lakes provide useful model systems to study microbial evolution and climate history. Hence, it becomes essential and timely to better understand factors controlling the microbes, and how, in turn, they may affect the functioning of these fragile ecosystems. Polar microbiology is an expanding field of research with exciting possibilities to provide new insights into microbial ecology and evolution. With this Research Topic we seek to bring together polar microbiologists studying different aquatic systems and components of the microbial food web, to stimulate discussion and reflect on these sensitive environments in a changing world perspective.

Microbial Exopolymers: Sources, Chemico-Physiological Properties, and Ecosystem Effects in the Marine Environment

Authors: --- --- --- --- et al.
Book Series: Frontiers Research Topics ISSN: 16648714 ISBN: 9782889456024 Year: Pages: 152 DOI: 10.3389/978-2-88945-602-4 Language: English
Publisher: Frontiers Media SA
Subject: Science (General) --- Oceanography --- Microbiology
Added to DOAB on : 2019-01-23 14:53:43
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Microorganisms (bacteria, archaea, microeukaryotes) in marine environments secrete a diverse array of exopolymeric substances that facilitate attachment to surfaces, the formation of organic colloids and larger aggregations of cells (marine snow), and that can influence many ocean, as well as global, processes. The aim of this Research Topic is to highlight recent advances in the sources, chemistry and function of these microbial-produced macromolecules. We encouraged original research and reviews on exopolymeric substances, from their sources, chemico-physiological properties, functions and ecosystem effects, and including their role in the Gulf of Mexico following the Deepwater Horizon oil spill disaster.

Outstanding Topics in Ocean Optics

Authors: ---
ISBN: 9783038977049 9783038977056 Year: Pages: 454 DOI: 10.3390/books978-3-03897-705-6 Language: English
Publisher: MDPI - Multidisciplinary Digital Publishing Institute
Subject: Science (General) --- Oceanography
Added to DOAB on : 2019-04-25 16:37:17
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Ocean optics is a branch of oceanography which is firmly embedded in studies of a great variety of ocean science and engineering questions. The interactive nature between radiative transfer of light and various dissolved and particulate constituents of seawater is at the core of ocean optics science and applications. The transfer of radiant solar energy has vital implications to life and climate on Earth, and the large variety of subjects of ocean optics ranges from the subtle problems of physical optics to optical remote sensing towards a better understanding of ocean biology, biogeochemistry and ecosystems and their roles in the Earth's system processes. The intention of this book is to present a collection of papers that generally share a common denominator of frontier topics in ocean optics which are unique, uncommon or outstanding in the literature, and to provide a balanced view of the extraordinary breadth of research in this field. Topics as diverse as measurements and modeling of radiative transfer, light fields, light scattering and polarization, ocean color, benthic optical properties, and the use of optics for characterizing seawater constituents are addressed in this book. The book is expected to be of interest and useful to a broad audience of professional ocean scientists, engineers and advanced students with an interest in ocean optics and applications of optical methods in oceanography.

Keywords

forward modeling --- suspended matter --- marine particles --- fractal structure --- organic carbon --- chlorophyll-a --- oceanic light field --- irradiance quartet --- apparent optical properties --- inelastic processes --- Gershun equation --- ocean euphotic zone --- phytoplankton pigments --- ocean color --- remote sensing --- MERIS --- global oceans --- light scattering --- light scattering by pure water --- light scattering by pure seawater --- anomalous properties of water --- remote-sensing reflectance --- bathymetry --- hyperspectral --- bottom mapping --- radiative transfer --- apparent optical properties --- 3D Monte Carlo numerical simulations --- downward irradiance --- upward radiance --- sea ice heterogeneity --- vertical attenuation coefficient --- melt ponds --- remote sensing --- coral reef --- sensor noise --- retrieval uncertainty --- particle dynamics --- optical properties --- suspended sediment --- phytoplankton --- PFT --- ocean colour --- satellite radiometry --- radiative transfer --- optical modelling --- vector radiative transfer --- polarization --- coupled systems --- atmosphere --- ocean --- forward modeling --- inverse problems --- marine optics --- inherent optical properties --- volume scattering function --- degree of linear polarization --- marine particles --- light scattering measurements --- LISST-VSF instrument --- ocean optics --- ocean color --- remote sensing --- radiative transfer approximation --- volume scattering function --- NASA PACE mission --- polarization --- ocean optics --- upwelling radiance distribution --- remote sensing --- remote sensing --- hyperspectral --- shallow water --- coral --- derivative --- radiative transfer --- canopy --- ocean color database --- oceanic carbon --- chromophoric dissolved organic matter --- dissolved organic carbon --- CDOM spectral slope --- ocean color remote sensing --- algorithm development --- ocean color algorithm validation --- ocean optics --- CDOM climatology --- CDOM and ENSO --- machine learning --- ocean optics --- backscattering ratio --- phytoplankton --- coated-sphere model --- bulk refractive index --- seawater component --- natural organic matter --- DOM --- FDOM --- CDOM --- Gelbstoff --- EEMS --- PARAFAC --- marine sensors --- Kallemeter --- FerryBox --- Trondheimsfjord --- Norway --- ocean optics --- light scattering --- Mueller matrix --- volume and surface integral methods

Selected Papers from the 15th Estuarine and Coastal Modeling Conference

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ISBN: 9783039212699 9783039212705 Year: Pages: 432 DOI: 10.3390/books978-3-03921-270-5 Language: English
Publisher: MDPI - Multidisciplinary Digital Publishing Institute
Subject: Science (General) --- Geography
Added to DOAB on : 2019-08-28 11:21:27
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Abstract

The 15th Estuarine and Coastal Modeling Conference provides a venue for commercial, academic, and government scientists and engineers from around the world to present and discuss the latest results and techniques in applied estuarine and coastal modeling. Prospective authors are invited to submit papers on a wide range of topic areas, including:• Pollutant Transport and Water Quality Prediction• Coastal Response to Climate Change• Modeling Techniques and Sensitivity Studies• Model Assessment• Modeling Specific Estuarine and Coastal Systems• Visualization and Analysis• Wave and Sediment Transport Modeling• Modeling of Chemicals and Floatables• Oil Spill Transport and Fate Modeling• Inverse Methods• Circulation Modeling• Facility Siting and CSO Studies• Data Assimilation• Nowcast/Forecast Modeling Systems• Modeling Systems with Strong Buoyancy Forcing• Modeling of Coupled Systems• Risk Analysis (Nuclear Reactors, Flood Forecasting)

Keywords

British Columbia --- environmental assessment --- marine construction --- circulation --- numerical model --- sediment model --- tidal current --- wind-driven current --- stratification --- initial dilution zone --- property-carrying particle model --- coupled models --- ecosystem simulation --- biophysical modeling --- Sandusky Bay --- Great Lakes --- tides --- tidal datums --- VDatum --- spatially varying uncertainty (SVU) --- north-east Gulf of Mexico --- Brown Passage --- Chatham Sound --- internal tides --- circulation --- numerical model --- stratification --- barotropic --- baroclinic --- Hood Canal --- floating bridge --- Salish Sea --- hydrodynamics --- Finite-Volume Community Ocean Model (FVCOM) --- circulation --- anthropogenic impact --- zone of influence --- Salish Sea model --- ice modeling --- operational forecast --- FVCOM --- CICE --- hydrodynamic modeling --- Great Lakes --- hydrodynamic numerical model --- H3D --- agriculture --- salt wedge --- climate change --- sea level rise --- river discharge --- channel deepening --- tidal constituent database --- ADvanced CIRCulation model (ADCIRC) --- Eastern North Pacific Ocean (ENPAC) --- coastal ocean modeling --- Gulf of Mexico --- operational nowcast and forecast system --- Finite Volume Community Ocean Model --- water level --- temperature --- salinity --- water quality --- model calibration --- estuary --- eutrophication --- CE-QUAL-W2 --- phytoplankton --- algal growth kinetics --- wave energy --- wind forcing --- large-wave hindcast --- multi-level nested-grid modeling --- CFSR --- NARR --- WaveWatch III --- SWAN --- hydrodynamics --- feasibility assessments --- nearshore restoration --- FVCOM --- Puget Sound --- Salish Sea --- numerical model --- sediment transport --- marine --- short-lived radioisotopes --- wave hindcast --- breakwater --- harbor --- estuary --- SWAN --- MIKE21SW --- unstructured grid --- storm surge --- coastal storm --- flooding --- compound events --- estuarine modeling --- lateral circulation --- tidal currents --- momentum balance --- coastal and estuarine modeling --- ADCIRC --- water level time series --- VDatum --- tidal datums --- statistical interpolation --- spatially varying uncertainty --- non-tidal zones --- marine grid population --- Texas --- western Louisiana --- Gulf of Mexico --- ocean modeling --- cloud computing --- data analysis --- geospatial data visualization

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