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Advances in Single Molecule, Real-Time (SMRT) Sequencing

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ISBN: 9783039217007 9783039217014 Year: Pages: 128 DOI: 10.3390/books978-3-03921-701-4 Language: English
Publisher: MDPI - Multidisciplinary Digital Publishing Institute
Subject: Science (General) --- Biology --- Microbiology
Added to DOAB on : 2019-12-09 11:49:16
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Abstract

PacBio’s single-molecule real-time (SMRT) sequencing technology offers important advantages over the short-read DNA sequencing technologies that currently dominate the market. This includes exceptionally long read lengths (20 kb or more), unparalleled consensus accuracy, and the ability to sequence native, non-amplified DNA molecules. From fungi to insects to humans, long reads are now used to create highly accurate reference genomes by de novo assembly of genomic DNA and to obtain a comprehensive view of transcriptomes through the sequencing of full-length cDNAs. Besides reducing biases, sequencing native DNA also permits the direct measurement of DNA base modifications. Therefore, SMRT sequencing has become an attractive technology in many fields, such as agriculture, basic science, and medical research. The boundaries of SMRT sequencing are continuously being pushed by developments in bioinformatics and sample preparation. This book contains a collection of articles showcasing the latest developments and the breadth of applications enabled by SMRT sequencing technology.

Jasmonic Acid Pathway in Plants

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ISBN: 9783039284887 / 9783039284894 Year: Pages: 346 DOI: 10.3390/books978-3-03928-489-4 Language: eng
Publisher: MDPI - Multidisciplinary Digital Publishing Institute
Subject: Science (General) --- Biology --- Plant Sciences
Added to DOAB on : 2020-06-09 16:38:57
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The plant hormone jasmonic acid (JA) and its derivative, an amino acid conjugate of JA (jasmonoyl isoleucine, JA-Ile), are signaling compounds involved in the regulation of defense and development in plants. The number of articles studying on JA has dramatically increased since the 1990s. JA is recognized as a stress hormone that regulates the plant response to biotic stresses such as herbivore and pathogen attacks, as well as abiotic stresses such as wounding and ultraviolet radiation. Recent studies have remarkably progressed the understanding of the importance of JA in the life cycle of plants. JA is directly involved in many physiological processes, including stamen growth, senescence, and root growth. JA regulates production of various metabolites such as phytoalexins and terpenoids. Many regulatory proteins involved in JA signaling have been identified by screening for Arabidopsis mutants. However, much more remains to be learned about JA signaling in other plant species. This Special Issue, “Jasmonic Acid Pathway in Plants”, contains 5 review and 15 research articles published by field experts. These articles will help with understanding the crucial roles of JA in its response to the several environmental stresses and development in plants.

Keywords

albino --- aroma --- Camellia sinensis --- chloroplast --- jasmonic acid --- light-sensitive --- stress --- tea --- volatile --- Panax ginseng --- gene expression --- ginsenoside --- methyl jasmonate --- MYB transcription factor --- dammarenediol synthase --- jasmonic acid --- signaling pathway --- environmental response --- biological function --- MeJA --- priming --- rice --- proteomics --- ROS --- chlorophyll fluorescence imaging --- MAP kinase --- jasmonate --- rice bacterial blight --- salicylic acid --- grain development --- Prunus avium --- Tuscan varieties --- jasmonic acid --- lipoxygenase --- bioinformatics --- gene expression --- heterotrimeric G proteins --- AtRGS1 --- jasmonates --- endocytosis --- diffusion dynamics --- Chinese flowering cabbage --- leaf senescence --- JA --- transcriptional activation --- adventitious rooting --- auxin --- ectopic metaxylem --- ectopic protoxylem --- ethylene --- hypocotyl --- jasmonates --- nitric oxide --- xylogenesis --- transcriptional regulators --- plant development --- jasmonic acid signaling --- gene expression --- Jasmonate-ZIM domain --- JAZ repressors --- Jas domain --- TIFY --- degron --- phylogenetic analysis --- ancestral sequences --- circadian clock --- jasmonic acid --- crosstalk --- jasmonic acid --- fatty acid desaturase --- multiseeded --- msd --- grain number --- MutMap --- sorghum --- Ralstonia solanacearum --- type III effector --- jasmonic acid --- salicylic acid --- Nicotiana plants --- PatJAZ6 --- jasmonic acid (JA) signaling pathway --- Pogostemon cablin --- patchouli alcohol --- biosynthesis --- jasmonate --- salt response --- Zea mays --- ROS --- proline --- ABA biosynthesis --- jasmonic acid --- crosstalk --- gibberellic acid --- cytokinin --- auxin --- jasmonic acid --- opr3 --- stress defense --- quantitative proteomics --- abiotic stresses --- jasmonates --- JA-Ile --- JAZ repressors --- transcription factor --- signaling --- antioxidant enzyme activity --- elicitor --- methyl jasmonate --- secondary metabolite --- signal molecules --- n/a

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